BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G10LP1|AL428787
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1516 1775 0.0
>3x_Contig1516
Length = 8750
Score = 1775 bits (895), Expect = 0.0
Identities = 898/900 (99%)
Strand = Plus / Plus
Query: 1 atcattgtgctaagaagttgctaccatggttcgatggtatgctaaaggctgacgaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4781 atcattgtgctaagaagttgctaccatggttcgatggtatgctaaaggctgacgaagaat 4840
Query: 61 acttcgctaagcacggtgaaccattgttctcctcccacatgttggatttgtccgaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4841 acttcgctaagcacggtgaaccattgttctcctcccacatgttggatttgtccgaagaaa 4900
Query: 121 ctgatgaggaaaacattggtctatgtgtcaaatacttcaccagaatggccaagatccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4901 ctgatgaggaaaacattggtctatgtgtcaaatacttcaccagaatggccaagatccacc 4960
Query: 181 aatggttggaaatggaaatcggtatcaccggtggtgaagaagatggtgtcaacaacgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4961 aatggttggaaatggaaatcggtatcaccggtggtgaagaagatggtgtcaacaacgaag 5020
Query: 241 gtacttctaacgacaaactttacaccactccagaaactgttttctctgtccacgaagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5021 gtacttctaacgacaaactttacaccactccagaaactgttttctctgtccacgaagctt 5080
Query: 301 tgtccaagatctctccaaacttctccattgccagtgccttcggtaacgtccacggtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5081 tgtccaagatctctccaaacttctccattgccagtgccttcggtaacgtccacggtgttt 5140
Query: 361 acaagatcgccgctgccctaaaaccagaattgttgggtactttccaagactacgctgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5141 acaagatcgccgctgccctaaaaccagaattgttgggtactttccaagactacgctgcta 5200
Query: 421 agcaattaaacaagaaggcagaagacaagccattgtacttggtcttccacggtggttccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5201 agcaattaaacaagaaggcagaagacaagccattgtacttggtcttccacggtggttccg 5260
Query: 481 gttcctccaccaaggacttccatactgccatcgatttcggtgtcgtaaaggtcaacttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5261 gttcctccaccaaggacttccatactgccatcgatttcggtgtcgtaaaggtcaacttgg 5320
Query: 541 atactgactgtcaattcgcttacttgtccggtatcagagactacgtcttgaacaagaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5321 atactgactgtcaattcgcttacttgtccggtatcagagactacgtcttgaacaagaagg 5380
Query: 601 actacttgatgaccccagtcggtaacccaaccggtgaagactctccaaacaagaagtact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5381 actacttgatgaccccagtcggtaacccaaccggtgaagactctccaaacaagaagtact 5440
Query: 661 acgacccaagagtctgggttagagaaggtgaaaagaccatgagcvagagaatcactcaag 720
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5441 acgacccaagagtctgggttagagaaggtgaaaagaccatgagcaagagaatcactcaag 5500
Query: 721 ctttggaaatcttccgtactaagggtgctttggaataaagttcttttgtttagtaccatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5501 ctttggaaatcttccgtactaagggtgctttggaataaagttcttttgtttagtaccatt 5560
Query: 781 atcccaaacaatttaacttataattttctatatacaatttaaataccagaacgcatgana 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5561 atcccaaacaatttaacttataattttctatatacaatttaaataccagaacgcatgaaa 5620
Query: 841 tgatcaaatgaagacatctgaaccattagttacaaaatgattggcagggatccgctgtgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5621 tgatcaaatgaagacatctgaaccattagttacaaaatgattggcagggatccgctgtgc 5680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6307
Number of Sequences: 1807
Number of extensions: 6307
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)